Plant phenotyping

The BisQue platform is part of the iPlant Cyberinfrastructure (now the CyVerse) to analyze plant-related images in the context of phenotype analysis. BisQue was integrated with iPlant’s authentication, cloud storage, and high-performance grid computing infrastructure and configured with sample data and algorithms designed to assay phenotypes such as directional root-tip growth or comparisons of seed size differences.

Related publications

Goff, Stephen A and Vaughn, Matthew and McKay, Sheldon and Lyons, Eric and Stapleton, Ann E and Gessler, Damian and Matasci, Naim and Wang, Liya and Hanlon, Matthew and Lenards, Andrew and others,
“The iPlant collaborative: cyberinfrastructure for plant biology”,
Frontiers in plant science, vol. 2, Jul. 2013.
[abstract] [PDF] [BibTex]
Abstract preview: The iPlant Collaborative (iPlant) is a United States National Science Foundation (NSF) funded project that aims to create an innovative, comprehensive, and foundational cyberinfrastructure in support ... more